STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1965PFAM: ComEC/Rec2-related protein; KEGG: sal:Sala_0831 ComEC/Rec2-related protein. (853 aa)    
Predicted Functional Partners:
ZMO1194
KEGG: swi:Swit_3825 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
 
  
 0.828
ZMO1165
KEGG: eli:ELI_05880 amidophosphoribosyltransferase.
 
  
 0.815
ZMO1624
TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: swi:Swit_3612 Mg chelatase, subunit ChlI; SMART: AAA ATPase.
 
  
 0.649
gltX2
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.646
ZMO1966
KEGG: bwe:BcerKBAB4_1184 hypothetical protein.
       0.613
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
 
  
 0.556
ZMO1967
Beta-lactamase; KEGG: gdj:Gdia_0195 beta-lactamase; PFAM: beta-lactamase.
       0.550
ZMO1963
TIGRFAM: citrate synthase I; KEGG: swi:Swit_3212 citrate synthase; PFAM: Citrate synthase; Belongs to the citrate synthase family.
       0.517
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: swi:Swit_2428 phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.495
ZMO0663
PFAM: DNA repair protein RadC; KEGG: swi:Swit_4476 DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.477
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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