STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO1983PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: xfa:XF1742 hypothetical protein. (329 aa)    
Predicted Functional Partners:
gfo
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: npu:Npun_F5032 oxidoreductase domain-containing protein; Belongs to the Gfo/Idh/MocA family.
 
 
 0.903
gnl
Gluconolactonase; Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present.
  
     0.766
ZMO1984
PFAM: aldo/keto reductase; KEGG: xfa:XF1724 sugar-phosphate dehydrogenase.
  
    0.676
ZMO1409
PFAM: inositol monophosphatase; KEGG: swi:Swit_2683 inositol-phosphate phosphatase.
      
 0.566
ZMO1757
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: bxe:Bxe_A0592 gluconate kinase; PFAM: shikimate kinase.
    
 0.527
ZMO0788
Gluconate 2-dehydrogenase (acceptor); KEGG: bur:Bcep18194_C7344 cytochrome c, class I; PFAM: cytochrome c class I.
     
  0.499
ZMO1284
KEGG: bid:Bind_3802 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I.
     
  0.499
glf
Sugar transporter; Allows uptake of glucose by the cell; allows growth on glucose minimal medium by E.coli cells impaired in glucose transport. Also transports fructose, but has a strong preference for glucose.
     
 0.466
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
      
 0.455
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.