STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO2007KEGG: eli:ELI_11125 hypothetical protein. (214 aa)    
Predicted Functional Partners:
ZMO0926
PFAM: Mammalian cell entry related domain protein; KEGG: swi:Swit_2554 hypothetical protein.
       0.813
ZMO1412
PFAM: ROSMUCR transcriptional regulator; KEGG: swi:Swit_2384 MucR family transcriptional regulator.
  
     0.643
ZMO0925
KEGG: bid:Bind_1552 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein.
       0.625
atpF
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.470
ZMO1876
KEGG: sal:Sala_2263 hypothetical protein.
  
     0.470
ZMO0418
PFAM: protein of unknown function DUF218; KEGG: swi:Swit_3011 hypothetical protein.
  
     0.451
ZMO1504
PFAM: protein of unknown function DUF1321; KEGG: swi:Swit_2716 hypothetical protein.
  
     0.420
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.