STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO2008PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0100 peptide/opine/nickel uptake ABC transporter permease. (327 aa)    
Predicted Functional Partners:
ZMO0981
KEGG: bxe:Bxe_A2990 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ZMO0982
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr1189 permease protein of oligopeptide ABC transporter.
 0.999
ZMO0800
KEGG: bvi:Bcep1808_6171 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase.
  
  
 0.866
ZMO0980
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
     
 0.694
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.626
ZMO1029
KEGG: btl:BALH_1667 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
   
 0.617
ZMO0978
PFAM: periplasmic binding protein; KEGG: swi:Swit_0259 periplasmic binding protein.
 
  
 0.581
ZMO0483
KEGG: swi:Swit_4731 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding.
     
 0.574
ZMO0491
PFAM: peptidase M24; KEGG: swi:Swit_1086 peptidase M24.
     
 0.541
ZMO1895
PFAM: PfkB domain protein; KEGG: eli:ELI_12720 sugar kinase.
     
 0.530
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.