STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB00_05365Band 7 protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
FB00_05360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.951
FB00_00440
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.708
FB00_19685
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.633
FB00_09820
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.
  
 0.556
FB00_05370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
FB00_05375
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
FB00_05380
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
FB00_05385
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
FB00_02630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.468
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.