STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB00_07970Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
FB00_20755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.716
FB00_12490
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.635
FB00_03520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.626
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.611
FB00_02290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.610
FB00_20745
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.572
FB00_13935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.476
FB00_18665
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.476
FB00_06895
dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.457
FB00_00680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.450
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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