STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB00_13150Dolichol-phosphate mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
lnt
Acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
    
 0.988
FB00_06780
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.701
FB00_12105
Dolichyl-phosphate beta-D-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.689
FB00_13165
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.548
FB00_12770
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.537
FB00_13160
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.533
FB00_08650
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.510
FB00_18470
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.478
FB00_09355
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.470
FB00_08395
Polyprenyl glycosylphosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.460
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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