STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB00_17450Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
FB00_17445
Kojibiose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
FB00_02230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
FB00_17425
Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
  0.586
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.551
FB00_13785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
FB00_08590
Glucosamine-1-phosphate N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.474
FB00_17455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
FB00_08155
Hypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.455
FB00_18715
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.447
FB00_04385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.428
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.