STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB00_20385HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)    
Predicted Functional Partners:
FB00_20380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.984
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.924
FB00_03355
Glycerol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.833
FB00_20405
DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA.
    
 0.798
FB00_20375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
nadK
Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
 0.766
FB00_20395
Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.656
FB00_20410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.621
FB00_20415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
FB00_06810
Nucleotidyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.489
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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