STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd0620Putative two-component sensor histidine kinase; HIS_KIN, HIS_KIN; hypothetical protein. (640 aa)    
Predicted Functional Partners:
Bd0621
InterPro: Response regulator receiver domain; hypothetical protein.
 
 
 
 0.960
Bd0622
Unnamed protein product; hypothetical protein.
       0.823
Bd0374
Putative transcriptional regulator PhoB-like; Probable aerobic respiration control protein FexA; hypothetical protein.
  
 
 
 0.797
ppaT
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.794
afsQ
Two-component system sensor histidine kinase/response regulator, hybrid ('one-component system'); InterPro: Response regulator receiver domain; hypothetical protein.
  
 
   0.792
Bd0299
InterPro: Response regulator receiver domain; hypothetical protein.
  
 
   0.785
Bd2576
Probable TWO-component sensor histidine kinase transcription regulatorprotein; hypothetical protein.
 
 
 
 0.783
aspC
Aspartate aminotransferase.
       0.779
Bd0233
InterPro: Response regulator receiver domain, DNA-binding response regulator mtrA, Transcriptional / Phosphate regulatory protein; hypothetical protein.
  
 
 
 0.750
kdpD-2
Sensor protein kdpD; InterPro: Histidine kinase C-terminal; hypothetical protein.
  
 
   0.747
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.