STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd0756Hypothetical protein predicted by Glimmer/Critica. (190 aa)    
Predicted Functional Partners:
Bd0755
Putative aminopeptidase, putative zinc protease protein; hypothetical protein.
       0.787
msrB
PilB-related protein; hypothetical protein; Belongs to the MsrB Met sulfoxide reductase family.
       0.554
Bd0758
Putative serine protease; hypothetical protein.
       0.549
nrfH
(Q9S1E6) Cytochrome c-type protein nrfH,; hypothetical protein.
  
 
 0.519
Bd2053
Periplasmic component of the Tol biopolymer transport system; hypothetical protein.
    
 
 0.510
ompH
Outer membrane protein.
    
 
 0.451
hsdR
Type I restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
    0.405
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.