STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolR-2tolR protein; Adventurous gliding motility protein, Biopolymer transport exbD protein; hypothetical protein. (158 aa)    
Predicted Functional Partners:
aglR-2
Adventurous gliding motility locus, TolQ like protein; hypothetical protein.
  
 
 0.936
aglS
Adventurous gliding motility locus; hypothetical protein.
     
 0.872
tolQ
InterPro: MotA/TolQ/ExbB proton channel family; hypothetical protein.
  
 
 0.754
aglR-3
Adventurous gliding motility protein R; Putative biopolymer transport protein; hypothetical protein.
  
 
 0.750
aglR
Putative adventurous gliding motility protein R.
  
 
 0.733
aglR-4
Adventurous gliding motility locus; hypothetical protein.
  
 
 0.733
Bd0834
Adventurous gliding motility locus; hypothetical protein.
       0.661
nlpD
InterPro: Peptidase family M23/M37, Membrane proteins related to metalloendopeptidases,; hypothetical protein.
      
 0.634
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
   0.568
aglX
Adventurous gliding motility protein X; TolQ Protein,; hypothetical protein.
  
   0.560
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.