STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd0972InterPro: Dehydrogenase E1 component; hypothetical protein. (376 aa)    
Predicted Functional Partners:
Bd0974
Branched chain keto acid dehydrogenase (E1) beta subunit, beta chain; hypothetical protein.
 0.999
pdhD
Dihydrolipoamide dehydrogenase, E3 subunit; InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein.
 
 
 0.995
lpdA
Dihydrolipoamide dehydrogenase; InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein.
 
 
 0.993
pdhC
Pyruvate dehydrogenase E2; InterPro: 2-Oxo acid dehydrogenase acyltransferase catalytic domain, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; hypothetical protein.
 
 0.985
sucB
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.985
Bd2028
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.969
ilvE
InterPro: Aminotransferases class-IV, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; hypothetical protein.
  
 
 0.919
lplA
Lipoate-protein ligase A; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes.
 
 
 0.882
ilvA
Threonine ammonia-lyase.
     
 0.835
metB
Cystathionine gamma-lyase; InterPro: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; hypothetical protein.
  
 
  0.803
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (26%) [HD]