node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bd1012 | rplC | Bd1012 | Bd2976 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.535 |
Bd1012 | rplK | Bd1012 | Bd2991 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.559 |
Bd1012 | rplL | Bd1012 | Bd2987 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.563 |
Bd1012 | rplQ | Bd1012 | Bd2949 | Hypothetical protein predicted by Glimmer/Critica. | InterPro: Ribosomal protein L17; hypothetical protein. | 0.559 |
Bd1012 | rplT | Bd1012 | Bd1625 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal chain protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.559 |
Bd1012 | rplU | Bd1012 | Bd3849 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.559 |
Bd1012 | rplV | Bd1012 | Bd2971 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.510 |
Bd1012 | rpmA | Bd1012 | Bd3848 | Hypothetical protein predicted by Glimmer/Critica. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.564 |
Bd1012 | rpsI | Bd1012 | Bd0493 | Hypothetical protein predicted by Glimmer/Critica. | 30S ribosomal protein S9; hypothetical protein; Belongs to the universal ribosomal protein uS9 family. | 0.559 |
Bd1012 | rpsP | Bd1012 | Bd2122 | Hypothetical protein predicted by Glimmer/Critica. | InterPro: Ribosomal protein S16; hypothetical protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.559 |
rplC | Bd1012 | Bd2976 | Bd1012 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Hypothetical protein predicted by Glimmer/Critica. | 0.535 |
rplC | rplK | Bd2976 | Bd2991 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.998 |
rplC | rplL | Bd2976 | Bd2987 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.997 |
rplC | rplQ | Bd2976 | Bd2949 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | InterPro: Ribosomal protein L17; hypothetical protein. | 0.994 |
rplC | rplT | Bd2976 | Bd1625 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal chain protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.995 |
rplC | rplU | Bd2976 | Bd3849 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.990 |
rplC | rplV | Bd2976 | Bd2971 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
rplC | rpmA | Bd2976 | Bd3848 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
rplC | rpsI | Bd2976 | Bd0493 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal protein S9; hypothetical protein; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplC | rpsP | Bd2976 | Bd2122 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | InterPro: Ribosomal protein S16; hypothetical protein; Belongs to the bacterial ribosomal protein bS16 family. | 0.988 |