STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1292Putative rhs-related protein; hypothetical protein. (442 aa)    
Predicted Functional Partners:
Bd1291
Hypothetical protein predicted by Glimmer/Critica; Putative PilG related protein; hypothetical protein.
  
  
 0.829
Bd3309
Conserved hypothetical protein.
  
  
 0.764
Bd1293
Hypothetical protein predicted by Glimmer/Critica.
       0.762
Bd0727
Putative cell surface protein with NHL repeat; hypothetical protein.
    0.743
Bd1169
Large Ala/Glu-rich protein; Also similar Myosin heavy chain, skeletal muscle; hypothetical protein.
 
 
 0.683
rhs
Rhs family protein.
   
  
 0.653
cpaF
cpaF protein; InterPro: AAA ATPase superfamily, Type II/IV secretion system protein, flp pilus assembly protein, ATPase CpaF; hypothetical protein.
     
 0.635
cpaF-2
Flp pilus assembly protein, ATPase CpaF; hypothetical protein.
     
 0.635
pilQ-2
Flp pilus assembly protein; Belongs to the bacterial secretin family.
      
 0.630
Bd2719
Hypothetical protein; InterPro: Phospholipid and glycerol acyltransferase (from motifs_6.msf),; hypothetical protein.
      
 0.629
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.