STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1476Hypothetical abductin-like protein, adventurous gliding motility locus; hypothetical protein. (488 aa)    
Predicted Functional Partners:
agmU-2
Adventurous gliding motility locus; hypothetical protein.
 
    0.939
aglS-2
Adventurous gliding motility locus; hypothetical protein.
 
     0.933
aglR-3
Adventurous gliding motility protein R; Putative biopolymer transport protein; hypothetical protein.
 
 
   0.814
agmU
Adventurous gliding motility locus; hypothetical protein.
 
    0.806
aglS
Adventurous gliding motility locus; hypothetical protein.
  
     0.774
Bd0908
InterPro: Bacterial regulatory proteins GntR family, Predicted transcriptional regulators; hypothetical protein.
  
     0.757
Bd1474
Adventurous gliding motility locus; hypothetical protein.
  
   0.756
Bd1475
Hypothetical protein; Adventurous gliding motility locus; hypothetical protein.
       0.741
Bd1477
Hypothetical protein; Adventurous gliding motility locus; hypothetical protein.
       0.741
Bd3867
Hypothetical protein predicted by Glimmer/Critica.
  
     0.727
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.