STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iucCPutative siderophore biosynthesis protein IucC. (582 aa)    
Predicted Functional Partners:
Bd1573
L-lysine 6-monooxygenase.
  
 0.994
iucB
Aerobactin siderophore biosynthesis protein iucB.
  
 0.994
iucA
Aerobactin siderophore biosynthesis protein iucA.
  
0.994
rhbD
Siderophore biosynthesis protein; AcetylCoA:N6-hydroxylsyine acetyl transferase; hypothetical protein.
  
 0.993
Bd1577
Multidrug resistance protein.
 
  
 0.905
Bd1578
Membrane protein.
 
    0.823
Bd1572
TonB-dependent receptor.
  
  
 0.816
tyrdc
Decarboxylase, putative; Tyrosine decarboxylase; hypothetical protein.
 
  
 0.723
Bd1579
Hypothetical protein predicted by Glimmer/Critica.
       0.451
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.