STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1604Putative cytochrome c biogenesis protein. (471 aa)    
Predicted Functional Partners:
Bd1606
Probable cytochrome C-type biogenesis protein; InterPro: Cytochrome c assembly protein; hypothetical protein.
  
 0.998
Bd3743
Hypothetical protein predicted by Glimmer/Critica.
  
    0.709
Bd3409
Hypothetical protein.
  
     0.683
Bd0109
Similar to cell wall-associated protein precursor wapA; Genetic locus, hit, associated with the host-independent phenotype, cell wall-associated protein; hypothetical protein.
  
     0.675
Bd1986
Hypothetical protein.
  
     0.646
Bd1587
Type II secretory pathway, component PulK; hypothetical protein.
  
     0.608
Bd3140
Putative exonuclease.
  
     0.581
Bd1603
Putative formiminoglutamase.
       0.565
Bd2879
Putative regulatory protein; InterPro: Cyclic nucleotide-binding domain, cAMP-binding domains-catabolite gene activator and regulatory subunitof cAMP-dependent protein kinases, Fumarate nitrate reduction regulatory protein, Anaerobic regulatory protein; hypothetical protein.
  
     0.555
Bd1167
Microtubule binding protein; InterPro: Phosphoglucomutase and phosphomannomutase family, microtubule binding protein D-CLIP-190 - fruit fly; hypothetical protein.
  
     0.551
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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