STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1769InterPro: ABC transporter; hypothetical protein. (236 aa)    
Predicted Functional Partners:
Bd1770
ABC-type multidrug transport system substrate-binding protein.
 
  
  0.961
Bd1768
ABC transporter permease protein; InterPro: Domain of unknown function DUF140; hypothetical protein.
  
 
  0.957
ftsX
Cell division protein ftsX; hypothetical protein.
  
 
 0.847
Bd3803
ABC-type organic solvent resistance transport system substrate-bindin protein.
 
  
  0.828
Bd3413
ABC transporter substrate binding protein.
    
  0.811
Bd3123
ABC transport system involved in organic solvent resistance, permease protein; hypothetical protein.
   
 
  0.806
Bd3411
ABC transporter, permease protein, probable CC3695 [imported] - Caulobacter crescentus; hypothetical protein.
   
 
  0.806
Bd3804
ABC-type transport system permease protein; hypothetical protein.
   
 
  0.806
Bd3805
ABC-type organic solvent resistance transporter, permease protein; ABC-type transport system permease protein; hypothetical protein.
   
 
  0.806
Bd3120
ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein.
    
  0.801
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.