STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcpBacterioferritin comigratory protein. (156 aa)    
Predicted Functional Partners:
Bd1804
InterPro: Proline-rich region; hypothetical protein.
       0.823
fadD
Long-chain fatty-acid-CoA ligase.
       0.568
ilvE
InterPro: Aminotransferases class-IV, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; hypothetical protein.
  
    0.518
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.501
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.441
trx-2
InterPro: Thioredoxin; hypothetical protein; Belongs to the thioredoxin family.
   
 
 0.432
Bd3525
Tryparedoxin peroxidase; hypothetical protein.
 
 
0.401
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.