STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1948Hypothetical protein predicted by Glimmer/Critica. (434 aa)    
Predicted Functional Partners:
purB
InterPro: Adenylosuccinate lyase; hypothetical protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.727
mccF
Microcin C7 self-immunity protein; Similar to muramoyltetrapeptide carboxypeptidase; hypothetical protein.
       0.727
Bd1951
D-alanyl-D-alanine carboxypeptidease, putative.
       0.727
mpl
Mpl protein; InterPro: Cytoplasmic peptidoglycan synthetases N-terminal; hypothetical protein.
       0.633
bsaA-2
InterPro: Glutathione peroxidase; hypothetical protein.
       0.554
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.