STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2142InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase, Histidine kinase C-terminal; hypothetical protein. (125 aa)    
Predicted Functional Partners:
Bd2141
Two-component hybrid sensor and regulator.
 
   0.946
Bd2143
InterPro: Response regulator receiver domain; hypothetical protein.
 
 
   0.867
Bd3528
InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 
 0.820
Bd1571
Putative sensor protein fixL; InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 
 
 0.776
Bd1657
Sensory box histidine kinase.
 
 
 
 0.755
Bd3430
InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 
 0.654
lon
ATP-dependent protease LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
    0.582
Bd3126
Sensor histidine kinase.
  
     0.573
Bd3648
Two-component hybrid sensor and regulator.
   
 
 0.560
Bd1535
Two-component hybrid sensor and regulator; InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 
 
 0.550
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.