STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2149InterPro: Nitroreductase family; hypothetical protein. (255 aa)    
Predicted Functional Partners:
Bd2150
Putative membrane protein; InterPro: Domain of unknown function DUF20; hypothetical protein.
       0.778
Bd2148
Hypothetical protein predicted by Glimmer/Critica.
       0.773
Bd2147
Hypothetical protein predicted by Glimmer/Critica.
       0.558
nodJ
ABC transporter, permease protein; Nodulation protein J, NodJ membrane transport protein; hypothetical protein.
  
    0.556
Bd1878
ABC-type multidrug transporter permease protein.
  
    0.556
Bd1879
ABC-type transporter ATP-binding protein or permease protein; hypothetical protein.
  
    0.556
yadH
ABC transporter integral membrane protein.
  
    0.556
Bd0456
Putative lactoylglutathione lyase (EC 4.4.1.5); hypothetical protein.
  
    0.552
gloA
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
    0.552
Bd3151
AMP-ligase; Putative acyl-CoA ligase; hypothetical protein.
  
 
 0.468
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.