STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2250Conserved hypothetical protein, homolog to osmotically inducible sensory protein - Sinorhizobium meliloti (strain 1021) magaplasmid pSymB; hypothetical protein. (230 aa)    
Predicted Functional Partners:
Bd1438
Hypothetical protein predicted by Glimmer/Critica.
  
    0.647
Bd3330
Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
  
  
 0.630
glpT
InterPro: General substrate transporters; hypothetical protein.
  
    0.500
glpT-2
Glycerol-3-phosphate transporter.
  
    0.472
Bd2251
DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.470
Bd2249
Hypothetical protein predicted by Glimmer/Critica; CDS.
       0.469
Bd0673
Hypothetical protein predicted by Glimmer/Critica; Probable twin-arginine translocation system protein substrate; hypothetical protein.
  
     0.443
Bd2248
Hypothetical protein predicted by Glimmer/Critica.
       0.419
Bd2473
Putative signal peptide protein containing LysM motif; InterPro: LysM motif; hypothetical protein.
  
    0.419
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.