STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malAalpha-D-1,4-glucosidase; InterPro: Glycoside hydrolase family 13; hypothetical protein. (557 aa)    
Predicted Functional Partners:
malF
Maltose/maltodextrin transport permease homologue; InterPro: Bacterial extracellular solute-binding protein family 1; hypothetical protein.
 
  
 0.933
amy
Alpha-amylase (EC 3.2.1.1) precursor, InterPro: Glycoside hydrolase family 13; hypothetical protein.
  
  
 0.921
potE
InterPro: Amino acid permease; hypothetical protein.
   
 0.882
amyX
Pullulanase; InterPro: Glycoside hydrolase family 13; hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
  
 0.822
Bd2280
Putative multisubunit Na+/H+ antiporter.
       0.689
malG
Protein involved in Maltose/ Maltodextrin transport; hypothetical protein.
  
 0.614
malK
ABC-type maltose transport, ATP binding protein; ABC-type transport protein involved in maltose and maltodextrin transport.; hypothetical protein.
 
  
 0.534
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
     
 0.474
Bd2246
Oxidoreductase; InterPro: Rieske iron-sulfur protein 2Fe-2S subunit; hypothetical protein.
  
  
 0.456
Bd2053
Periplasmic component of the Tol biopolymer transport system; hypothetical protein.
  
 
 0.453
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.