STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parA-2Partition protein, ParA homolog; InterPro: ParA family ATPase; hypothetical protein. (249 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein; InterPro: ParB-like partition protein; hypothetical protein; Belongs to the ParB family.
 
 0.990
Bd2329
Hypothetical protein predicted by Glimmer/Critica.
     
 0.917
Bd3904
Conserved hypothetical protein; Integral membrane protein CcmA involved in cell shape determination.
     
 0.661
Bd0464
Similar to cell-division initiation protein (septum placement); hypothetical protein.
      
 0.652
bolA
InterPro: BolA-like protein; hypothetical protein; Belongs to the BolA/IbaG family.
     
 0.646
Bd0463
Conserved hypothetical protein; Belongs to the UPF0235 family.
      
 0.630
Bd1327
Hypothetical protein predicted by Glimmer/Critica.
      
 0.630
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
      
 0.629
Bd0466
Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
      
 0.629
btuB
Outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23.
    
 
 0.574
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.