STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2389Cardiolipin synthetase; InterPro: Phospholipase D/Transphosphatidylase; hypothetical protein. (380 aa)    
Predicted Functional Partners:
Bd0448
Phospholipase D family protein,Transphosphatidylase; hypothetical protein.
  
  
 
0.929
pgpA
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.911
Bd2390
Homologous to C. elegans hypothetical protein; hypothetical protein.
       0.625
Bd2391
Hypothetical protein predicted by Glimmer/Critica.
       0.625
Bd2392
Cell morphology protein.
       0.583
Bd2388
Hypothetical protein predicted by Glimmer/Critica.
       0.572
Bd2053
Periplasmic component of the Tol biopolymer transport system; hypothetical protein.
 
  
 0.543
pgsA
PgsA protein; Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
   
 0.437
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.