STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2541SM-20-related protein. (209 aa)    
Predicted Functional Partners:
Bd2542
ABC-type transporter with fused ATP-binding and permease domain; InterPro: ABC transporter transmembrane region; hypothetical protein.
       0.773
Bd2543
ABC-type multidrug transporter with fused ATPase and permease domains; InterPro: ABC transporter transmembrane region; hypothetical protein.
       0.773
Bd1612
Putative molybdopterin oxidoreductase.
   
   0.632
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.632
Bd1729
Sterol desaturase family protein; InterPro: SUR2-type hydroxylase/desaturase catalytic domain; hypothetical protein.
   
  
 0.609
Bd2540
Amine oxidase, flavin-containing; Probable Twin-arginine translocation system substrate; hypothetical protein.
       0.572
mgtE
Mg2+ transporter MgtE; Acts as a magnesium transporter.
       0.561
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
   
    0.544
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
    0.403
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.