STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhBXanthine dehydrogenase, C-terminal subunit; Xanthine dehydrogenase; hypothetical protein. (775 aa)    
Predicted Functional Partners:
xdhA
Xanthine dehydrogenase; InterPro: FAD binding domain in molybdopterin dehydrogenase, Xanthine dehydrogenase; hypothetical protein.
 0.999
XdhC
Xanthine dehydrogenase accessory factor XdhC, putative, Hypothetical protein yqeB, putative synthases, InterPro: DUF182; hypothetical protein.
 
 
 0.992
yicP
Probable adenine deaminase (synthesis xanthine); InterPro: Adenine deaminase; hypothetical protein; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
  
  0.982
pnp-2
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
   
 
 0.917
hprT
InterPro: Phosphoribosyl transferase, Hypoxanthine-guanine phosphoribosyltransferase, YacA-like protein; hypothetical protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
hpt
Hypoxanthine-guanine phosphoribosyltransferase homologue; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
aspC
Aspartate aminotransferase.
 
 
  
 0.685
Bd2632
Carboxylic ester hydrolase; Unnamed protein product; InterPro: Carboxylesterases type-B; hypothetical protein; Belongs to the type-B carboxylesterase/lipase family.
     
 0.516
phaz
PHB depolymerase, Poly(3-hydroxybutyrate) depolymerase, POLY(hydroxyalkanoate) depolymerase precursor; hypothetical protein.
       0.508
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.