STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2932Conserved hypothetical protein. (1051 aa)    
Predicted Functional Partners:
Bd3603
Hypothetical protein predicted by Glimmer/Critica.
  
     0.756
Bd0209
Putative hemagglutinin/hemolysin-related protein; hypothetical protein.
  
     0.691
Bd3821
Hypothetical transmembrane protein; hypothetical protein.
  
     0.605
Bd3241
Hypothetical protein predicted by Glimmer/Critica.
  
     0.567
Bd2288
Putative ubiquitin ligase; hypothetical protein.
  
 
   0.547
Bd1086
Hypothetical protein predicted by Glimmer/Critica.
  
     0.530
Bd3459
InterPro: D-Ala-D-Ala carboxypeptidase 3 (S13) family; hypothetical protein.
  
     0.521
Bd0816
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); hypothetical protein.
  
     0.520
Bd0376
Extracellular serine protease; hypothetical protein.
  
 
 0.510
Bd2936
Hypothetical protein.
 
     0.477
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.