STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nolG-3Efflux transporter; InterPro: Acriflavin resistance protein, Nodulation protein; hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1070 aa)    
Predicted Functional Partners:
Bd3059
Outer membrane efflux protein; hypothetical protein.
 
   0.835
Bd0708
Probable macrolide-specific efflux protein; CDS.
 
 
 0.702
Bd1875
Putative protein secretion protein, HlyD family.
 
 
 0.649
Bd3057
Similar to transcriptional regulator (MarR family); Transcription regulator; hypothetical protein.
     
 0.639
Bd3818
Conserved hypothetical protein; Membrane-fusion protein.
  
 
 0.615
Bd3060
InterPro: Bacterial regulatory proteins TetR family, Transcriptional regulator, TetR family; hypothetical protein.
     
 0.559
tolC
InterPro: Outer membrane efflux protein, Probable porin (OMP) ABC transporter protein; hypothetical protein.
 
 
 0.495
Bd0707
FusA/NodT family protein; CDS.
 
 
 0.491
yajC
Preprotein translocase YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
 
 0.478
Bd1915
InterPro: Outer membrane efflux protein, outer membrane protein tolC precursor; hypothetical protein.
 
 
 0.410
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.