STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyaCProbable adenylate cyclase. (480 aa)    
Predicted Functional Partners:
cyaA
InterPro: Guanylate cyclase, Adenylate cyclase, family 3 (some proteins contain HAMP domain); hypothetical protein.
  
   
 0.912
Bd1971
Hypothetical protein; FOG: EAL domain.
 
 0.806
phcB
Regulatory protein.
   
  0.798
Bd3208
Probable cyclic nucleotide binding protein.
 
 
  0.791
Bd3056
Cyclic AMP receptor protein,catabolite gene activator; InterPro: Response regulator receiver domain, Putative cyclic nucleotide-binding protein; hypothetical protein.
 
 
  0.744
Bd2098
Hypothetical protein predicted by Glimmer/Critica; InterPro: Cyclic nucleotide-binding domain, regulatory protein; hypothetical protein.
 
 
  0.731
Bd1502
Putative cAMP-dependent protein kinase.
 
 
  0.728
cyaB
Adenylate cyclase, putative; hypothetical protein.
      
 0.725
Bd2713
Hyperpolarization-activated, cyclic nucleotide-gated K+; InterPro: Cyclic nucleotide-binding domain; hypothetical protein.
 
 
  0.706
Bd3125
Sensor histidine kinase; InterPro: Domain of unknown function DUF9; hypothetical protein.
 
  
 0.641
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.