STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd3370Conserved hypothetical protein. (352 aa)    
Predicted Functional Partners:
Bd3371
ABC-type metal ion transport system, periplasmic component; Belongs to the bacterial solute-binding protein 9 family.
 
     0.949
Bd3372
Manganese and zinc uptake system ATP-binding protein; hypothetical protein.
 
     0.845
Bd3373
ABC-type zinc and manganese transporter, ATPase component; ATP binding component of ABC-type transport family; hypothetical protein.
       0.811
Bd3369
Hypothetical protein.
       0.782
Bd3368
Hypothetical protein.
       0.773
Bd1923
Putative polyketide cyclase; Oligoketide cyclase/lipid transport protein; hypothetical protein.
  
     0.765
Bd2106
Cofac_haem_bdg domain-containing protein; Unnamed protein product; hypothetical protein.
  
     0.746
Bd1167
Microtubule binding protein; InterPro: Phosphoglucomutase and phosphomannomutase family, microtubule binding protein D-CLIP-190 - fruit fly; hypothetical protein.
  
     0.699
top6A
Top6A protein; DNA topoisomerase VI subunit A.
  
     0.695
Bd0975
Unnamed protein product; hypothetical protein.
  
     0.663
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.