STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (394 aa)    
Predicted Functional Partners:
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
 0.999
aroK
Shikimate synthase; Probable pentafunctional arom polypeptide (EC 2.5.1.19)(3-phosphoshikimate 1-carboxyvinyltransferase) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); hypothetical protein.
 
 
 0.998
aroB
3-dehydroquinate synthetase.
 
  
 0.979
cmk
Cytidylate kinase (CK) (Cytidine monophosphate kinase)(CMP kinase); hypothetical protein.
 
  
 0.934
Bd3496
Conserved hypothetical protein; Shikimate kinase/3-dehydroquinate synthase - Thermotoga maritima (strain MSB8); hypothetical protein.
  
  
 0.925
Bd0925
Chorismate mutase domain-containing protein; Unnamed protein product; putative maltose O-acetyltransferase; hypothetical protein.
  
  
 0.842
aroAG
3-deoxy-7-phosphoheptalonate synthase/chorismate mutase; InterPro: DAHP synthetase class I; hypothetical protein.
 
  
 0.842
Bd3498
Uncharacterized protein conserved in bacteria.
       0.786
hisC
InterPro: Aminotransferases class-I, Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase); hypothetical protein.
 
  
 0.761
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
     
 0.736
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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