STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd3621InterPro: Bacterial regulatory protein LysR family; hypothetical protein. (306 aa)    
Predicted Functional Partners:
Bd1745
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.768
Bd1127
InterPro: Bacterial regulatory protein LysR family, Transcriptional regulator; hypothetical protein.
  
     0.765
oxyR
InterPro: Bacterial regulatory protein LysR family; hypothetical protein.
  
     0.764
Bd3712
Putative LysR-family transcriptional regulator; InterPro: Bacterial regulatory protein LysR family; hypothetical protein.
  
     0.758
lysR-3
InterPro: Bacterial regulatory protein LysR family, putative LysR-family transcriptional regulator; hypothetical protein.
  
     0.747
Bd0897
Transcriptional regulator, LysR family; Probable transcriptional regulator; hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.724
yfeR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.716
oxyR-2
Redox-sensitive transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.692
oxyR-3
InterPro: Bacterial regulatory protein LysR family, Redox-sensitive transcriptional activator; hypothetical protein.
  
     0.686
Bd3688
Transcription regulator; hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.622
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.