STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH53497.1Spore gernimation protein. (368 aa)    
Predicted Functional Partners:
AOH53495.1
Hypothetical protein.
  
 0.917
AOH53494.1
Hypothetical protein.
 
  
 0.870
AOH56250.1
Spore gernimation protein KC.
  
 0.766
AOH53600.1
Hypothetical protein.
 
  
 0.750
AOH53562.1
Hypothetical protein.
 
  
 0.727
AOH56251.1
Spore gernimation protein KB.
 
  
 0.722
AOH54601.1
Hypothetical protein.
 
  
 0.682
AOH53560.1
Hypothetical protein.
 
  
 0.672
ABE28_004370
Transposase; Frameshifted; internal stop.
 
  
 0.657
AOH57008.1
Spore gernimation protein GerA.
 
  
 0.653
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.