STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH53527.1Luciferase. (381 aa)    
Predicted Functional Partners:
AOH53528.1
Peptide synthetase.
 
     0.916
AOH53529.1
3-oxoadipate enol-lactonase.
 
  
 0.839
AOH53526.1
GntR family transcriptional regulator.
       0.748
AOH53531.1
NADH-dependent FMN reductase.
 
 
 0.723
AOH54770.1
Glyoxalase.
 
    0.712
AOH53530.1
Carnitine dehydratase; Belongs to the aldehyde dehydrogenase family.
       0.671
AOH52969.1
Non-ribosomal peptide synthetase.
   
 
 0.637
AOH55204.1
Ring-cleaving dioxygenase.
 
  
 0.541
AOH55098.1
Luciferase.
 
     0.514
AOH52801.1
ABC transporter substrate-binding protein.
 
  
 0.485
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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