STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH53873.1Spore gernimation protein GerPD. (59 aa)    
Predicted Functional Partners:
AOH53872.1
Hypothetical protein.
 
  
 0.983
AOH53874.1
Hypothetical protein.
 
  
 0.970
AOH53871.1
Hypothetical protein.
 
  
 0.965
AOH53875.1
Spore gernimation protein KA.
 
  
 0.964
AOH53876.1
Spore gernimation protein GerPA.
 
  
 0.954
AOH54150.1
Hypothetical protein.
  
     0.754
tlp
Small acid-soluble spore protein Tlp; Belongs to the Tlp family.
  
     0.707
AOH55671.1
Hypothetical protein.
  
     0.673
AOH56148.1
Hypothetical protein.
  
     0.669
AOH53422.1
YfhD family protein.
  
     0.663
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.