STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH53958.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
AOH57147.1
Hypothetical protein.
  
     0.612
AOH57252.1
General stress protein.
  
     0.537
AOH54525.1
Transposase.
 
     0.508
AOH55924.1
Transposase.
 
     0.508
AOH56980.1
Transposase.
 
     0.508
AOH56602.1
Cytochrome aa3 quinol oxidase subunit IV.
  
     0.505
AOH56284.1
DNA-3-methyladenine glycosylase.
  
     0.492
AOH55677.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
 
     0.479
AOH56599.1
Penicillin-binding protein.
  
    0.474
AOH56613.1
GNAT family N-acetyltransferase.
  
     0.455
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.