STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH54645.1GntR family transcriptional regulator. (244 aa)    
Predicted Functional Partners:
AOH54646.1
Aldehyde dehydrogenase.
       0.682
AOH54644.1
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.661
AOH56064.1
GntR family transcriptional regulator.
  
    0.618
AOH56024.1
GntR family transcriptional regulator.
  
    0.562
AOH54988.1
Hypothetical protein.
  
    0.535
AOH54647.1
Hypothetical protein.
       0.499
AOH53488.1
Hypothetical protein.
  
  
 0.471
AOH55167.1
Hypothetical protein.
  
  
 0.471
AOH54643.1
Hypothetical protein.
       0.417
AOH53638.1
GntR family transcriptional regulator.
  
   
0.402
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.