STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55059.1Glycine/betaine ABC transporter substrate-binding protein. (305 aa)    
Predicted Functional Partners:
AOH55058.1
Amino acid ABC transporter permease.
 
 0.999
AOH55060.1
Choline ABC transporter permease.
 
 0.999
AOH55061.1
Glycine/betaine ABC transporter ATP-binding protein.
 
 0.998
AOH53059.1
Glycine/betaine ABC transporter substrate-binding protein.
 
 
 0.723
AOH56019.1
Hypothetical protein.
 
    0.577
AOH53201.1
Low temperature-induced protein.
 
    0.575
AOH54589.1
Hypothetical protein.
 
    0.573
AOH55436.1
Hypothetical protein.
  
    0.517
AOH56017.1
Hypothetical protein.
  
    0.517
speD
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.
       0.468
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
Server load: low (40%) [HD]