STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55236.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
AOH57097.1
Peptidase M23.
  
 0.775
AOH56705.1
Hypothetical protein.
 
  
 0.670
AOH54001.1
Peptidase.
 
  
 0.578
AOH55235.1
ATP-dependent DNA helicase RecQ.
  
    0.504
AOH54663.1
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.489
AOH55237.1
Spore coat protein CotJA.
       0.466
AOH55238.1
Spore coat protein CotJB.
       0.466
AOH55239.1
Spore coat protein CotJC.
  
    0.461
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
 
   
 0.446
AOH56145.1
Peptidase M4.
  
     0.402
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.