STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55320.1Lysine 2,3-aminomutase. (467 aa)    
Predicted Functional Partners:
AOH56355.1
Lysine 2,3-aminomutase.
  
  
 
0.900
AOH55322.1
Putative beta-lysine N-acetyltransferase.
  
 0.857
AOH55319.1
Hypothetical protein.
  
  
 0.848
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.806
AOH56353.1
Putative beta-lysine N-acetyltransferase.
  
 0.778
AOH52986.1
Chemotaxis protein CheR.
    
   0.621
AOH55518.1
Chemotaxis protein CheR.
    
   0.621
AOH55321.1
Sigma-54-dependent Fis family transcriptional regulator.
     
 0.542
AOH55317.1
Hypothetical protein.
 
     0.462
AOH55325.1
Acyl CoA:acetate/3-ketoacid CoA transferase subunit alpha.
  
  
 0.450
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.