STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55482.15-carboxymethyl-2-hydroxymuconate isomerase. (127 aa)    
Predicted Functional Partners:
AOH55480.1
4-hydroxyphenylacetate isomerase.
 
 
 0.989
AOH55481.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
 
 
 0.988
AOH55485.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.942
AOH55484.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
    0.789
AOH56503.1
Hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.770
AOH55483.1
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component.
 
  
 0.701
AOH55267.1
Dioxygenase.
  
  
 0.622
AOH56669.1
4-hydroxyphenylacetate 3-monooxygenase, oxygenase component.
 
  
 0.614
AOH53728.1
Phenylacetic acid degradation operon negative regulatory protein PaaX.
  
     0.500
AOH55035.1
Hypothetical protein.
  
     0.449
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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