STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55563.1C-type cytochrome biogenesis protein CcsB. (392 aa)    
Predicted Functional Partners:
AOH55564.1
Cytochrome C biogenesis protein.
 
  
 0.985
AOH55565.1
Thiol-disulfide oxidoreductase; Catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c.
 
  
 0.909
AOH55508.1
Menaquinol-cytochrome C reductase.
 
    0.770
AOH56164.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.768
AOH55507.1
Cytochrome b6; Electron transport protein.
  
  
 0.759
AOH55506.1
Cytochrome C oxidase Cbb3; Component of the menaquinol-cytochrome c reductase complex.
  
  
 0.732
AOH55695.1
Hypothetical protein.
  
     0.730
AOH55527.1
Hypothetical protein.
  
     0.726
AOH52905.1
KinB-signaling pathway activation protein.
  
     0.720
AOH55561.1
PAS domain-containing sensor histidine kinase.
 
  
 0.714
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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