STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55583.1Stage V sporulation protein AB. (140 aa)    
Predicted Functional Partners:
AOH55584.1
Stage V sporulation protein AA.
 
  
 0.965
AOH55582.1
Stage V sporulation protein AE.
 
  
 0.830
AOH55581.1
Stage V sporulation protein AF.
 
  
 0.803
AOH53946.1
Stage V sporulation protein AC.
 
  
 0.672
AOH52817.1
Stage II sporulation protein E.
  
     0.645
AOH53119.1
Stage V sporulation protein AD.
 
  
 0.608
AOH55718.1
Hypothetical protein.
  
     0.604
AOH53947.1
Stage V sporulation protein AD.
 
  
 0.601
AOH55542.1
Germination protein YpeB.
  
    0.599
AOH55774.1
Stage II sporulation protein P.
  
   
 0.576
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.