STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55598.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
AOH53102.1
ATP-dependent DNA helicase PcrA.
      0.854
AOH55599.1
ADP-ribose pyrophosphatase.
  
    0.822
AOH52793.1
Protein sspF.
  
     0.585
AOH53871.1
Hypothetical protein.
  
     0.556
tlp
Small acid-soluble spore protein Tlp; Belongs to the Tlp family.
  
     0.530
AOH55600.1
Oxidoreductase.
       0.481
AOH53813.1
Glutathione synthetase.
  
     0.470
AOH54668.1
Hypothetical protein.
  
     0.468
AOH55273.1
DNA ligase D.
 
   
 0.444
AOH53944.1
Sporulation protein.
  
     0.424
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.