STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55629.1Hypothetical protein. (329 aa)    
Predicted Functional Partners:
AOH55628.1
L,D-transpeptidase.
  
    0.690
AOH55710.1
Hypothetical protein.
  
     0.556
AOH53934.1
CYTH domain-containing protein.
  
     0.542
AOH55631.1
Arginine ABC transporter permease.
       0.518
AOH55630.1
Peptide ABC transporter ATP-binding protein.
       0.475
AOH56152.1
Hypothetical protein.
  
     0.469
AOH55627.1
methylmalonyl-CoA epimerase.
       0.444
AOH57117.1
Hypothetical protein.
  
     0.440
AOH55626.1
methylmalonyl-CoA carboxyltransferase.
       0.412
AOH55957.1
Cytochrome C assembly protein.
  
     0.410
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.