STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55666.1Stage III sporulation protein SpoAB; Necessary for complete engulfment of forespore. (171 aa)    
Predicted Functional Partners:
AOH55667.1
Stage III sporulation protein AA.
 
  
 0.994
AOH55665.1
Stage III sporulation protein AC.
 
  
 0.981
AOH55664.1
Stage III sporulation protein AD.
 
  
 0.970
AOH55661.1
Stage III sporulation protein AG.
 
  
 0.968
AOH55663.1
Stage III sporulation protein AE.
 
  
 0.966
AOH55662.1
Stage III sporulation protein AF.
 
  
 0.954
AOH55660.1
Hypothetical protein.
 
  
 0.856
AOH55596.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
  
 0.844
AOH55755.1
Sporulation protein YqfC.
  
  
 0.819
AOH54203.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
  
 0.765
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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