STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH55754.1Sporulation protein YqfD. (395 aa)    
Predicted Functional Partners:
AOH55755.1
Sporulation protein YqfC.
 
  
 0.989
AOH52813.1
Sporulation protein YabP.
 
   
 0.831
AOH54176.1
Sporulation integral membrane protein YlbJ.
 
   
 0.828
AOH57208.1
Stage II sporulation protein R.
  
  
 0.816
AOH55774.1
Stage II sporulation protein P.
  
   
 0.804
AOH57171.1
Sporulation transcriptional regulator SpoIIID.
  
   
 0.801
AOH55753.1
Phosphate starvation-inducible protein PhoH.
       0.800
AOH54203.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
   
 0.799
AOH55647.1
SpoIVB peptidase.
  
     0.772
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.771
Your Current Organism:
Bacillus muralis
NCBI taxonomy Id: 264697
Other names: B. muralis, Bacillus fresconis, Bacillus muralis Heyrman et al. 2005, Bacillus sp. LMG 20238, DSM 16288, LMG 20238, LMG:20238
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